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AML Profiling by scRNA-seq
(?)
scRNA-seq
Acute Myeloid Leukemia (AML)
2019
Minden
DNAmod Database
(?)
SQLite, DNA Modifications
Other
2016
Hoffman
Datasets for Predicting TF Binding Using Virtual ChIP-seq
(?)
Virtual ChIP-seq
Other
2018
Hoffman
Expression Profiles of TN Breast Tumors (Bulk)
(?)
Microarray
Breast Cancer
2019
Haibe-Kains
Expression Profiles of TN Breast Tumors (Stromal, Epithelial)
(?)
Microarray
Breast Cancer
2019
Haibe-Kains
HNSCC PDX Engraftment: Aligned Sequencing Reads
(?)
scRNA-seq
Head and Neck Squamous Cell Carcinoma (HNSCC)
2018
Pugh
HPV16-Positive Cell Line Sequencing
(?)
ChIP-seq, RNA-seq, ATAC-seq
HPV
2020
Hoffman
Knock-Down of 8 RAS-Pathway Genes in Colon Cancer
(?)
Microarray
Colon Cancer
2013
Haibe-Kains
MM2S Data
(?)
Microarray
Medulloblastoma (MB)
2015
Haibe-Kains
Mappability of Mouse and Human Genomes/Methylomes
(?)
Genome/Methylome Mappability
Other
2016
Hoffman
MetaGxBreast
(?)
Transcriptomic Dataset Collection
Breast Cancer
2018
Haibe-Kains
MetaGxOvarian
(?)
Transcriptomic Dataset Collection
Ovarian Cancer
2018
Haibe-Kains
MetaGxPancreas
(?)
Transcriptomic Dataset Collection
Pancreatic Cancer
2018
Haibe-Kains
Multi-omics profiling of chronic lymphocytic leukemia
(?)
RNA-seq,ChIP-seq
Chronic Lymphocytic Leukaemia (CLL)
2018
Gaiti
PANETs - RNA-seq, Exome & Genome
(?)
RNA-seq, WES, WGS
Pancreatic Neuroendocrine Tumour (PANET)
2020
Pugh
PGC-1alpha Expression in Aging Mice
(?)
Microarray
Other
2013
Haibe-Kains
PeaKO Data
(?)
DNA Motif
Other
2019
Hoffman
PharmacoGx
(?)
PharmacoSet Object
Other
2016
Haibe-Kains
Single-cell DNA methylomes of normal B and CLL cells
(?)
scRNA-seq, scDNAm-seq
Chronic Lymphocytic Leukaemia (CLL)
2018
Gaiti
Single-cell multi-omics profiling of glioma cells
(?)
scRNA-seq, scDNAm-seq
Glioblastoma (GB)
2020
Gaiti
Single-cell multi-omics profiling of myelodysplastic syndrome
(?)
scRNA-seq
Myelodysplastic Syndrome (MDS)
2022
Gaiti
Stage 1 TGCTs Expression Profile
(?)
Microarray
Testicular Germ Cell Tumor (TGCT)
2018
Haibe-Kains
VirChIP Predictions for 36 TFs in Roadmap Epigenomics Project
(?)
Virtual ChIP-seq
Other
2018
Hoffman
VirChIP Predictions for TF Binding (Cistrome and ENCODE-DREAM)
(?)
Virtual ChIP-seq
Other
2018
Hoffman
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