ToxicoDB

Investigate the pathways triggered by exposure to toxic substances

Description: A database of curated toxicogenomics datasets that provides convenient data summary and visualization to mine these complex data. Users can find drug and gene annotations, visualize gene expression within datasets as well as differential gene expression for drug of interest with the option to download the data.

Authors: Sisira Kadambat Nair, Christopher Eeles, Chantal Ho, Gangesh Beri, Esther Yoo, Denis Tkachuk, Amy Tang, Parwaiz Nijrabi, Petr Smirnov, Heewon Seo, Danyel Jennen & Benjamin Haibe-Kains

Lab: Haibe-Kains

Resource Type: Database

Keywords: ToxicoDB, toxicogenomics, datasets, visualization, annotations, gene expression

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Citation

Sisira Kadambat Nair, Christopher Eeles, Chantal Ho, Gangesh Beri, Esther Yoo, Denis Tkachuk, Amy Tang, Parwaiz Nijrabi, Petr Smirnov, Heewon Seo, Danyel Jennen, Benjamin Haibe-Kains, ToxicoDB: an integrated database to mine and visualize large-scale toxicogenomic datasets, Nucleic Acids Research, Volume 48, Issue W1, 02 July 2020, Pages W455–W462, https://doi.org/10.1093/nar/gkaa390

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Years

2024

2023

2022