Orchestration platform for reproducing pharmacogenomic analyses.

Description: ORCESTRA is a cloud-based platform that provides a transparent, reproducible and flexible computational framework for processing and sharing high-throughput multimodal biomedical data. The platform enables processing of genomic and pharmacological profiles of cancer samples through the use of automated processing pipelines executed through the Pachyderm data versioning and orchestration tool. ORCESTRA creates an integrated and fully documented data object known as a PharmacoSet (PSet) for future analyses using the Bioconductor PharmacoGx package. A PSet includes cell line and drug annotations, along with molecular and pharmacological data from the largest pharmacogenomic studies and consortia

Authors: Haibe-Kains, Benjamin, Mammoliti, Anthony
Lab: Haibe-Kains
Version: 1


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